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Retina International's Scientific Newsletter |
|
Mutation Database Mutations of the Bestrophin Gene |
Recent update from: 16.01.2004
| Phenotype | Mutation | Basechange | Nucleotide | Exon | Restriction Site | Classification & Remarks |
Mutation Database | OMIM | Reference |
|---|---|---|---|---|---|---|---|---|---|
| Sequence |
|
0 | 0 |
The sequence data are adjusted to a sequence given in a WORD file which can be downloaded here. Nucleotides are counted from the published transcription start site since VMD2 contains an untranslated first exon.
|
|
|
|
||
| VMD2 | Thr 6 Pro | ACA>CCA | 0104 | 02 |
Nx 2, Nx6, Nx8, Nx11, A21 Dutch |
goto HMGD | 607854-000005 |
(12)
(2) |
|
| VMD2 | Thr 6 Arg | ACA>AGA | 0105 | 02 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Val 9 Met | GTG>ATG | 0113 | 02 |
O, B20 German |
goto HMGD | 607854-000007 |
(10)
(6) |
|
| VMD2 | Val 9 Ala | GTG>GCG | 0114 | 02 | Fnu4HI |
SL3 Swedish |
goto HMGD |
|
(12)
(13) (2) |
| VMD2 | Ala 10 Thr | GCT>ACT | 0116 | 02 |
C, B48 Great Britain |
goto HMGD |
|
(6)
(10) |
|
| VMD2 | Ala 10 Val | GCT>GTT | 0117 | 02 | MseI |
Nx3 Dutch |
goto HMGD |
|
(2)
|
| VMD2 | Asn 11 Ile | AAT>ATT | 0120 | 02 |
German |
|
|
(5)
|
|
| VMD2 | Arg 13 His | CGC>CAC | 0126 | 02 |
A |
goto HMGD |
|
(3)
|
|
| VMD2 | Ser 16 Phe | TCC>TTC | 0135 | 02 |
Mi |
goto HMGD |
|
(8)
|
|
| VMD2 | Phe 17 Cys | TTC>TGC | 0138 | 02 |
Em |
goto HMGD |
|
(7)
(8) |
|
| VMD2 | Leu 21 Val | CTG>GTG | 0149 | 02 |
Cosegregates with S209N
B-29, B-30 Canadian, Great Britain |
goto HMGD |
|
(6)
|
|
| VMD2 | Trp 24 Cys | TGG>TGT | 0160 | 02 |
G German |
goto HMGD |
|
(7)
(10) |
|
| VMD2 | Arg 25 Trp | CGG>TGG | 0161 | 02 |
B-47 |
goto HMGD |
|
(7)
|
|
| VMD2 | Arg 25 Gln | CGG>CAG | 0162 | 02 |
Czech |
goto HMGD |
|
(10)
|
|
| VMD2 | Ser 27 Arg | AGC>AGG | 0169 | 02 |
B-43 German |
goto HMGD |
|
(6)
|
|
| VMD2 | Tyr 29 His | TAC>CAC | 0173 | 02 |
German |
|
|
(5)
|
|
| VMD2 | Lys 30 Arg | AAG>AGG | 0177 | 02 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Leu 41 Pro | CTC>CCC | 0210 | 02 |
German |
|
|
(5)
|
|
| VMD2 | Gln 58 Leu | CAA>CTA | 0264 | 03 |
B-28 German |
goto HMGD |
|
(6)
|
|
| VMD2 | Ile 73 Val | ATC>ATA | 0305 | 03 |
Nx3 |
|
|
(12)
|
|
| VMD2 | Ile 73 Asn | ATT>AAC | 0306 | 03 |
Ba |
goto HMGD |
|
(8)
|
|
| VMD2 | Phe 80 Leu | TTC>TTA | 0328 | 03 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Leu 82 Val | CTG>GTG | 0331 | 03 |
Dx2 Danish |
goto HGMD |
|
(2)
|
|
| VMD2 | Tyr 85 His | TAC>CAC | 0341 | 04 | PmlI |
SL76 Swedish |
goto HMGD | 607854-000002 |
(12)
(13) (2) |
| VMD2 | Val 89 Ala | AAC>AGC | 0354 | 04 | -PshAI |
|
goto HMGD |
|
(4)
|
| VMD2 | Thr 91 Ile | ACC>ATC | 0360 | 04 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Arg 92 Cys | CGC>TGC | 0362 | 04 |
SL5 Swedish |
goto HGMD |
|
(2)
|
|
| VMD2 | Arg 92 Ser | CGC>AGC | 0362 | 04 |
B-15 German |
goto HMGD |
|
(6)
|
|
| VMD2 | Arg 92 His | CGC-CAC | 0363 | 04 |
Ti |
goto HMGD |
|
(8)
|
|
| VMD2 | Trp 93 Cys | TGG>TGC | 0367 | 04 | +Fnu4HI |
S1, B Swedish |
goto HMGD | 607854-000001 |
(12)
(2) (3) |
| VMD2 | Gln 96 His | CAG>CAC | 0376 | 04 | BsrI |
Nx10 Dutch |
goto HGMD |
|
(2)
|
| VMD2 | Asn 99 Lys | AAC>AAA | 0385 | 04 |
B-3, B-51 German |
goto HMGD |
|
(6)
|
|
| VMD2 | Leu 100 Arg | CTG>CGG | 0387 | 04 |
B-24, B-44 German |
goto HMGD |
|
(6)
|
|
| VMD2 | Pro 101 Thr | CCG>ACG | 0389 | 04 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Trp 102 Arg | TGG>CGG | 0392 | 04 |
German |
|
|
(5)
|
|
| VMD2 | Asp 104 His | GAC>CAC | 0398 | 04 |
German |
|
|
(5)
|
|
| VMD2 | Asp 104 Glu | GAC>GAA | 0400 | 04 | BsiEI |
SL2 |
goto HMGD |
|
(12)
(13) (2) |
| VMD2 | Asn 133 Lys | AAC>AAG | 0487 | 04 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Gly 135 Ser | GGC>AGC | 0491 | 04 |
SL4 Swedish |
goto HMGD |
|
(7)
(2) |
|
| VMD2 | Leu 140 Arg | CTG>CGG | 0507 | 04 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Arg 141 Ser | CGC>AGC | 0509 | 04 |
Found together with IVS5+1G-C
B-32 German |
|
|
(6)
|
|
| VMD2 | Arg 141 His | CGC>CAC | 0510 | 04 | Conserved in RFP proteins German | goto HMGD |
|
(7)
|
|
| VMD2 | Ala 195 Val | GCG>GTG | 0672 | 05 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Ile 201 Thr | ATC>ACC | 0690 | 05 |
Conserved in RFP proteins
|
goto HMGD |
|
(7)
|
|
| VMD2 | Leu 207 Ile | CTC>ATC | 0707 | 05 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Ser 209 Asn | AGC>AAC | 0714 | 05 |
Cosegregates with L21V
B-30, B-29 Canadian, Great Britain |
goto HMGD |
|
(6)
|
|
| VMD2 | IVS5+1g-c | ACgtg>Acctg | 0724 | IVS5 |
Found together with R141S
B-32 German |
goto HMGD |
|
(6)
|
|
| VMD2 | Arg 218 Ser | CGT>AGT | 0740 | 06 |
SU5, B-13, B-53 Swedish, German |
goto HGMD |
|
(2)
(6) |
|
| VMD2 | Arg 218 Cys | CGT>TGT | 0740 | 06 |
Dx1, Sc, C, D Dutch, German |
goto HMGD |
|
(10)
(8) (3) (2) |
|
| VMD2 | Arg 218 His | CGT>CAT | 0741 | 06 | Conserved in RFP proteins Ge, Tu | goto HMGD |
|
(7)
(8) |
|
| VMD2 | Cys 221 Trp | TGT>TGG | 0751 | 06 |
spontaneous
|
goto HMGD |
|
(11)
|
|
| VMD2 | Gly 222 Val | GGA>GTA | 0753 | 06 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Leu 224 Met | CTG>ATG | 0758 | 06 |
B-22, B-26 German |
goto HMGD |
|
(6)
|
|
| VMD2 | Leu 224 Pro | CTG>CCG | 0759 | 06 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Tyr 227 Asn | TAC>AAC | 0767 | 06 | +PflMI |
Nx1, Nx12, D Canadian, Dutch |
goto HMGD | 607854-000004 |
(12)
(2) |
| VMD2 | Tyr 227 Cys | TAC>TGC | 0768 | 06 |
H German |
goto HMGD |
|
(10)
(7) |
|
| VMD2 | Ser 231 Arg | AGT>AGG | 0781 | 06 |
B-8 German |
goto HMGD |
|
(6)
|
|
| VMD2 | Val 235 Leu | GTG>CTG | 0791 | 06 |
Sch |
goto HMGD |
|
(8)
|
|
| VMD2 | Val 235 Met | GTG>ATG | 0791 | 06 |
T Hungarian |
goto HMGD |
|
(10)
|
|
| VMD2 | Thr 237 Arg | ACA>AGA | 0798 | 06 |
B-52 German |
goto HMGD |
|
(6)
|
|
| VMD2 | Thr 241 Asn | ACT>AAT | 0810 | 07 |
German |
|
|
(5)
|
|
| VMD2 | Ala 243 Thr | GCG>ACG | 0815 | 07 |
|
goto HMGD | 607854-000010 |
(7)
|
|
| VMD2 | Ala 243 Val | GCG>GTG | 0816 | 07 |
B-12, B-27, B-41 German |
|
|
(6)
|
|
| VMD2 | 875delC | AAC CCA>AA_ CCA | 0875 | 07 |
Reported as P260fsX288
German |
|
|
(5)
|
|
| VMD2 | Phe 276 Leu | TTC>TTG | 0916 | 07 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | 929delTTC | CAG TTC TTC TTC TAT >CAG ___ TTC TTC TAT | 0929 | 07 | Conserved in RFP proteins German | goto HMGD |
|
(7)
|
|
| VMD2 | Gln 293 Lys | CAG>AAG | 0965 | 04 | Fnu4HI |
Nx4 Dutch |
goto HGMD |
|
(2)
|
| VMD2 | Leu 294 Val | CTC>GTC | 0968 | 07 |
German |
|
|
(5)
|
|
| VMD2 | 969delTCA | CAG CTC ATC AAC>CAG C__ _TC AAC | 0969 | 08 |
Reported as I295del
W, N, B-4, B-19, B-21, B-23, B-35
German |
goto HMGD | 601854-000006 |
(10)
(6) |
|
| VMD2 | Ile 295 Thr | ATT>ACT | 0972 | 08 |
Japan |
|
|
(15)
|
|
| VMD2 | Asn 296 His | AAC>CAC | 0974 | 08 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Asn 296 Ser | AAC>AGC | 0975 | 08 |
Ah |
goto HMGD |
|
(8)
|
|
| VMD2 | Pro 297 Ala | CCC>GCC | 0977 | 08 |
Di |
goto HMGD |
|
(10)
(7) |
|
| VMD2 | Pro 297 Ser | CCC>TCC | 0979 | 08 |
|
goto HMGD |
|
(1)
|
|
| VMD2 | Phe 298 Ser | TTT>TCT | 0981 | 08 |
German |
|
|
(5)
|
|
| VMD2 | Gly 299 Glu | GGA>GAA | 0984 | 08 | MboI |
SG1 Swedish |
goto HMGD | 607854-000003 |
(12)
(2) |
| VMD2 | Glu 300 Lys | GAG>AAG | 0986 | 08 |
B-25 German |
goto HMGD |
|
(7)
|
|
| VMD2 | Glu 300 Asp | GAG-GAC | 0988 | 08 |
E, F |
|
|
(7)
(1) (3) |
|
| VMD2 | Asp 301 Asn | GAT>AAT | 0989 | 08 |
B-6 |
goto HMGD |
|
(6)
|
|
| VMD2 | 989delGAT | GAG GAT GAT GAT GAT TTT>GAG ___ GAT GAT GAT TTT | 0989 | 08 |
Conserved in RFP proteins
|
goto HMGD |
|
(7)
|
|
| VMD2 | Asp 301 Glu | GAT>GAG | 0991 | 08 |
G, B-1, B-16 |
goto HMGD |
|
(3)
|
|
| VMD2 | Asp 302 His | GAT>CAT | 0992 | 08 |
C |
|
|
(9)
|
|
| VMD2 | Asp 302 Val | GAT>GTT | 0993 | 08 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Asp 302 Gly | GAT>GGT | 0993 | 08 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Asp 303 Glu | GAT>GAA | 0997 | 08 |
A |
|
|
(9)
|
|
| VMD2 | Phe 305 Ser | TTT>TCT | 1002 | 08 |
F Great Britain |
goto HMGD |
|
(10)
|
|
| VMD2 | Glu 306 Gly | GAG>GGG | 1005 | 08 |
Conserved in RFP proteins
|
goto HMGD |
|
(7)
|
|
| VMD2 | Glu 306 Asp | GAG>GAC | 1006 | 08 |
Conserved in RFP proteins
|
goto HMGD |
|
(7)
|
|
| VMD2 | Thr 307 Ala | ACC>GCC | 1007 | 08 |
|
goto HMGD |
|
(7)
|
|
| VMD2 | Thr 307 Ile | ACC>ATC | 1008 | 08 |
H |
goto HMGD |
|
(7)
(3) |
|
| VMD2 | Asn 308 His | AAC>AGC | 1011 | 08 |
B |
|
|
(9)
|
|
| VMD2 | Ile 310 Thr | ATT>ACT | 1017 | 08 |
B-6 German |
goto HMGD |
|
(6)
|
|
| VMD2 | Val 311 Gly | GTG>GGC | 1020 | 08 |
B-5, B-7 German |
goto HMGD |
|
(6)
|
|
| VMD2 | 1556delCA | CTT CAC AGT>CTT __C AGT | 1556 | 10 |
I |
goto HMGD |
|
(3)
|
|
| AMD | Arg 105 Cys | CGC>TGC | 0401 | 04 |
|
goto HMGD |
|
(7)
|
|
| AMD | Glu 119 Gln | GAG>CAG | 0443 | 04 |
|
goto HMGD | 607854-000008 |
(7)
(14) (1) |
|
| AMD | Lys 149 ter | AAG>TAG | 0533 | 04 |
|
goto HMGD |
|
(7)
|
|
| AMD | Thr 216 Ile | ACC>ATC | 0735 | 06 |
|
goto HMGD |
|
(1)
|
|
| AMD | Val 275 Ile | GTC>ATC | 0911 | 07 |
|
goto HMGD |
|
(7)
|
|
| AMD | Leu 567 Phe | CTC>TTC | 1787 | 10 |
|
|
|
(1)
(14) |
|
| AVMD | Thr 6 Pro | ACA>CCA | 0104 | 02 |
A21 German |
goto HMGD | 607854-000005 |
(6)
|
|
| AVMD | Arg 47 His | CGC>CAC | 0228 | 02 |
A-27 German |
goto HMGD | 607854-000011 |
(6)
|
|
| AVMD | Ala 146 Lys | GCA>AAA | 0524 | 04 |
|
goto HMGD | 607854-000001 |
(1)
(14) |
|
| AVMD | Ala 243 Val | GCG>GTG | 0816 | 07 |
B-10, A-13, A-18, A-36, A-37 German |
goto HMGD |
|
(6)
|
|
| AVMD | Asp 312 Asn | GAC>AAC | 1022 | 08 |
A-3 German |
goto HMGD |
|
(6)
|
|
| Bull's Eye Maculopathy | Glu 119 Gln | GAG>CAG | 0443 | 04 |
Caucasian |
goto HMGD | 607854-000008 |
(1)
(14) |
|
| Drusen | Thr 216 Ile | ACC>ATC | 0735 | 06 |
|
goto HMGD |
|
(14)
|
|
| Drusen | Leu 567 Phe | CTC>TTC | 1787 | 10 |
|
goto HMGD |
|
(14)
|
|
| Polymoprhism | Val 311 Val | GTC>GTT | 1021 | 08 |
|
|
|
(6)
|
|
| Polymorphism | 33C/T | GACCC>GATCC | 0033 | 01 |
Reported as -118c/t
|
|
|
(1)
|
|
| Polymorphism | -70t/c | ctcac>cttac | -0070 | 5'UTR | Reported as -221t/c, -118t/c German |
|
|
(10)
(6) (1) |
|
| Polymorphism | Tyr 29 Tyr | TAC>TAT | 0175 | 02 |
|
|
|
(3)
|
|
| Polymorphism | Leu 37 Leu | TTA>CTA | 0197 | 02 |
SL3, Nx3, Ge, Gi, De, Em, Mi, B, C German, Swedish |
|
|
(12)
(10) (9) |
|
| Polymorphism | Thr 55 Thr | ACG>ACA | 0253 | 03 |
|
|
|
(7)
|
|
| Polymorphism | Leu 67 Leu | CTG>CTC | 0289 | 03 |
|
|
|
(1)
|
|
| Polymorphism | Ile 73 Ile | ATC>ATA | 0307 | 03 |
Ge, Gi, Sc, Ti |
|
|
(7)
(8) (1) (3) |
|
| Polymorphism | Gln 74 Gln | GAA>AAA | 0310 | 03 |
|
|
|
(1)
|
|
| Polymorphism | IVS3-12c/t | cccct>cctct | 0336 | IVS3 |
German |
|
|
(5)
|
|
| Polymorphism | IVS3-32c/t | ccctc>ccttc | 0336 | IVS3 |
German |
|
|
(5)
|
|
| Polymorphism | IVS3-17c/t | ccccg>cctcg | 0336 | IVS3 |
German |
|
|
(5)
|
|
| Polymorphism | IVS3-26c/t | cccct>cctct | 0336 | IVS3 |
German |
|
|
(5)
|
|
| Polymorphism | IVS4-24c/t | accgc>actgc | 0570 | IVS4 |
SG1, Dx1 |
|
|
(12)
(1) (6) |
|
| Polymorphism | Leu 206 Leu | CTG>CTN | 0706 | 05 |
|
|
|
(7)
|
|
| Polymorphism | Gln 208 Gln | CAG>CAA | 0712 | 05 |
German |
|
|
(5)
|
|
| Polymorphism | IVS5-6c/t | ccccc>cctcc | 0725 | IVS5 |
|
|
|
(7)
|
|
| Polymorphism | Arg 218 Arg | CGT>TGT | 0742 | 06 |
Dx1 |
|
|
(12)
|
|
| Polymorphism | Ile 232 Ile | ATC>ATA | 0784 | 06 |
|
|
|
(7)
(1) |
|
| Polymorphism | IVS6-27del(TCC)3 | acatc ctcct cctcc tcctc ctcct cccag>aca__ _____ __tcc tcctc ctcct cccag | 0803 | IVS6 |
|
|
|
(10)
(6) (9) |
|
| Polymorphism | IVS6-27insTCC | acatc ctcct cctcc tcctc ctcct cccag>acatc ctcct cctcc tcctc ctcct cctcc cag | 0803 | IVS6 |
|
|
|
(1)
|
|
| Polymorphism | IVS6-27del(TCC)2 | acatc ctcct cctcc tcctc ctcct cccag>aca__ ____t cctcc tcctc ctcct cccag | 0803 | IVS6 |
|
|
|
(1)
|
|
| Polymorphism | Val 240 Val | GTG>GTC | 0808 | 07 |
German |
|
|
(5)
|
|
| Polymorphism | IVS8-21del t | cttct>ct_ct | 1037 | IVS8 |
|
|
|
(7)
|
|
| Polymorphism | Pro 341 Pro | CCC>CCT | 1111 | 09 |
SL76 German |
|
|
(12)
(1) (6) |
|
| Polymorphism | Glu 342 Glu | GAG>GAA | 1114 | 09 |
|
|
|
(1)
|
|
| Polymorphism | Thr 470 Thr | ACA>ACG | 1498 | 10 |
Nx3, SL1, S1, SL76, Sch, Em, Ge, A, B, C German, Swedish |
|
|
(12)
(10) (6) (1) (8) (3) (9) |
|
| Polymorphism | Ser 519 Ser | AGC>AGT | 1645 | 10 |
S1, SL2, SL3, SL76 German, Swedish |
|
|
(12)
(10) (1) |
|
| Polymorphism | Glu 525 Ala | GAG>GCG | 1662 | 10 |
|
|
|
(1)
|
|
| Polymorphism | Thr 536 Thr | ACT>ACC | 1696 | 10 |
Dx1, SL1, SL2, SL3, SL76, Sch, Ge German, Swedish |
|
|
(12)
(10) (1) (8) (3) |
|
| Polymorphism | Glu 557 Lys | GAA>AAA | 1757 | 10 |
Homozygous control
|
|
|
(1)
|
|
| Polymorphism | Thr 561 Ala | GAA>AAA | 1769 | 10 |
|
goto HMGD |
|
(1)
|
|
| Polymorphism | Glu 578 Val | GAA>GTA | 1820 | 10 |
|
|
|
(10)
|
|
| Polymorphism | IVS10-27t/c | tatgc>tacgc | 1828 | IVS10 |
|
|
|
(1)
|
|
| Polymorphism | 1935ins g | ctgtc>ctggtc | 1935 | 3'UTR |
|
|
|
(1)
|
|
| Polymorphism | 1979t/c | ggtta>ggcta | 1979 | 3'UTR |
|
|
|
(1)
|
|
| Polymorphism | 2062t/c | cattg>cactg | 2062 | 3'UTR |
|
|
|
(1)
|
References
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This site is maintained and edited by
Dr. rer. medic. Markus Preising, Dipl.Biol. Molecular Genetics Laboratory Department of Pediatric Ophthalmology, Strabismology and Ophthalmogenetics University of Regensburg Head: Prof. Dr. med. Birgit Lorenz |
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