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Scientific Newsletter


Mutation Database
Mutations of the Bestrophin Gene

Recent update from: 16.01.2004


Phenotype Mutation Basechange Nucleotide Exon Restriction Site Classification
& Remarks
Mutation Database OMIM Reference
Sequence

0 0
The sequence data are adjusted to a sequence given in a WORD file which can be downloaded here. Nucleotides are counted from the published transcription start site since VMD2 contains an untranslated first exon.




VMD2 Thr 6 Pro ACA>CCA 0104 02

Nx 2, Nx6, Nx8, Nx11, A21
Dutch
goto HMGD 607854-000005 (12)
(2)
VMD2 Thr 6 Arg ACA>AGA 0105 02


goto HMGD
(7)
VMD2 Val 9 Met GTG>ATG 0113 02

O, B20
German
goto HMGD 607854-000007 (10)
(6)
VMD2 Val 9 Ala GTG>GCG 0114 02 Fnu4HI
SL3
Swedish
goto HMGD
(12)
(13)
(2)
VMD2 Ala 10 Thr GCT>ACT 0116 02

C, B48
Great Britain
goto HMGD
(6)
(10)
VMD2 Ala 10 Val GCT>GTT 0117 02 MseI
Nx3
Dutch
goto HMGD
(2)
VMD2 Asn 11 Ile AAT>ATT 0120 02


German


(5)
VMD2 Arg 13 His CGC>CAC 0126 02

A
goto HMGD
(3)
VMD2 Ser 16 Phe TCC>TTC 0135 02

Mi
goto HMGD
(8)
VMD2 Phe 17 Cys TTC>TGC 0138 02

Em
goto HMGD
(7)
(8)
VMD2 Leu 21 Val CTG>GTG 0149 02
Cosegregates with S209N
B-29, B-30
Canadian, Great Britain
goto HMGD
(6)
VMD2 Trp 24 Cys TGG>TGT 0160 02

G
German
goto HMGD
(7)
(10)
VMD2 Arg 25 Trp CGG>TGG 0161 02

B-47
goto HMGD
(7)
VMD2 Arg 25 Gln CGG>CAG 0162 02

Czech
goto HMGD
(10)
VMD2 Ser 27 Arg AGC>AGG 0169 02


B-43
German
goto HMGD
(6)
VMD2 Tyr 29 His TAC>CAC 0173 02


German


(5)
VMD2 Lys 30 Arg AAG>AGG 0177 02


goto HMGD
(7)
VMD2 Leu 41 Pro CTC>CCC 0210 02


German


(5)
VMD2 Gln 58 Leu CAA>CTA 0264 03


B-28
German
goto HMGD
(6)
VMD2 Ile 73 Val ATC>ATA 0305 03

Nx3


(12)
VMD2 Ile 73 Asn ATT>AAC 0306 03

Ba
goto HMGD
(8)
VMD2 Phe 80 Leu TTC>TTA 0328 03


goto HMGD
(7)
VMD2 Leu 82 Val CTG>GTG 0331 03

Dx2
Danish
goto HGMD
(2)
VMD2 Tyr 85 His TAC>CAC 0341 04 PmlI
SL76
Swedish
goto HMGD 607854-000002 (12)
(13)
(2)
VMD2 Val 89 Ala AAC>AGC 0354 04 -PshAI


goto HMGD
(4)
VMD2 Thr 91 Ile ACC>ATC 0360 04


goto HMGD
(7)
VMD2 Arg 92 Cys CGC>TGC 0362 04

SL5
Swedish
goto HGMD
(2)
VMD2 Arg 92 Ser CGC>AGC 0362 04


B-15
German
goto HMGD
(6)
VMD2 Arg 92 His CGC-CAC 0363 04

Ti
goto HMGD
(8)
VMD2 Trp 93 Cys TGG>TGC 0367 04 +Fnu4HI
S1, B
Swedish
goto HMGD 607854-000001 (12)
(2)
(3)
VMD2 Gln 96 His CAG>CAC 0376 04 BsrI
Nx10
Dutch
goto HGMD
(2)
VMD2 Asn 99 Lys AAC>AAA 0385 04


B-3, B-51
German
goto HMGD
(6)
VMD2 Leu 100 Arg CTG>CGG 0387 04


B-24, B-44
German
goto HMGD
(6)
VMD2 Pro 101 Thr CCG>ACG 0389 04


goto HMGD
(7)
VMD2 Trp 102 Arg TGG>CGG 0392 04


German


(5)
VMD2 Asp 104 His GAC>CAC 0398 04


German


(5)
VMD2 Asp 104 Glu GAC>GAA 0400 04 BsiEI
SL2
goto HMGD
(12)
(13)
(2)
VMD2 Asn 133 Lys AAC>AAG 0487 04


goto HMGD
(7)
VMD2 Gly 135 Ser GGC>AGC 0491 04

SL4
Swedish
goto HMGD
(7)
(2)
VMD2 Leu 140 Arg CTG>CGG 0507 04


goto HMGD
(7)
VMD2 Arg 141 Ser CGC>AGC 0509 04
Found together with IVS5+1G-C
B-32
German


(6)
VMD2 Arg 141 His CGC>CAC 0510 04
Conserved in RFP proteins German goto HMGD
(7)
VMD2 Ala 195 Val GCG>GTG 0672 05


goto HMGD
(7)
VMD2 Ile 201 Thr ATC>ACC 0690 05
Conserved in RFP proteins
goto HMGD
(7)
VMD2 Leu 207 Ile CTC>ATC 0707 05


goto HMGD
(7)
VMD2 Ser 209 Asn AGC>AAC 0714 05
Cosegregates with L21V
B-30, B-29
Canadian, Great Britain
goto HMGD
(6)
VMD2 IVS5+1g-c ACgtg>Acctg 0724 IVS5
Found together with R141S
B-32
German
goto HMGD
(6)
VMD2 Arg 218 Ser CGT>AGT 0740 06

SU5, B-13, B-53
Swedish, German
goto HGMD
(2)
(6)
VMD2 Arg 218 Cys CGT>TGT 0740 06

Dx1, Sc, C, D
Dutch, German
goto HMGD
(10)
(8)
(3)
(2)
VMD2 Arg 218 His CGT>CAT 0741 06
Conserved in RFP proteins Ge, Tu goto HMGD
(7)
(8)
VMD2 Cys 221 Trp TGT>TGG 0751 06
spontaneous

goto HMGD
(11)
VMD2 Gly 222 Val GGA>GTA 0753 06


goto HMGD
(7)
VMD2 Leu 224 Met CTG>ATG 0758 06


B-22, B-26
German
goto HMGD
(6)
VMD2 Leu 224 Pro CTG>CCG 0759 06


goto HMGD
(7)
VMD2 Tyr 227 Asn TAC>AAC 0767 06 +PflMI
Nx1, Nx12, D
Canadian, Dutch
goto HMGD 607854-000004 (12)
(2)
VMD2 Tyr 227 Cys TAC>TGC 0768 06

H
German
goto HMGD
(10)
(7)
VMD2 Ser 231 Arg AGT>AGG 0781 06


B-8
German
goto HMGD
(6)
VMD2 Val 235 Leu GTG>CTG 0791 06

Sch
goto HMGD
(8)
VMD2 Val 235 Met GTG>ATG 0791 06

T
Hungarian
goto HMGD
(10)
VMD2 Thr 237 Arg ACA>AGA 0798 06


B-52
German
goto HMGD
(6)
VMD2 Thr 241 Asn ACT>AAT 0810 07


German


(5)
VMD2 Ala 243 Thr GCG>ACG 0815 07


goto HMGD 607854-000010 (7)
VMD2 Ala 243 Val GCG>GTG 0816 07


B-12, B-27, B-41
German


(6)
VMD2 875delC AAC CCA>AA_ CCA 0875 07
Reported as P260fsX288
German


(5)
VMD2 Phe 276 Leu TTC>TTG 0916 07


goto HMGD
(7)
VMD2 929delTTC CAG TTC TTC TTC TAT >CAG ___ TTC TTC TAT 0929 07
Conserved in RFP proteins German goto HMGD
(7)
VMD2 Gln 293 Lys CAG>AAG 0965 04 Fnu4HI
Nx4
Dutch
goto HGMD
(2)
VMD2 Leu 294 Val CTC>GTC 0968 07


German


(5)
VMD2 969delTCA CAG CTC ATC AAC>CAG C__ _TC AAC 0969 08
Reported as I295del W, N, B-4, B-19, B-21, B-23, B-35
German
goto HMGD 601854-000006 (10)
(6)
VMD2 Ile 295 Thr ATT>ACT 0972 08


Japan


(15)
VMD2 Asn 296 His AAC>CAC 0974 08


goto HMGD
(7)
VMD2 Asn 296 Ser AAC>AGC 0975 08

Ah
goto HMGD
(8)
VMD2 Pro 297 Ala CCC>GCC 0977 08

Di
goto HMGD
(10)
(7)
VMD2 Pro 297 Ser CCC>TCC 0979 08



goto HMGD
(1)
VMD2 Phe 298 Ser TTT>TCT 0981 08


German


(5)
VMD2 Gly 299 Glu GGA>GAA 0984 08 MboI
SG1
Swedish
goto HMGD 607854-000003 (12)
(2)
VMD2 Glu 300 Lys GAG>AAG 0986 08

B-25
German
goto HMGD
(7)
VMD2 Glu 300 Asp GAG-GAC 0988 08

E, F


(7)
(1)
(3)
VMD2 Asp 301 Asn GAT>AAT 0989 08

B-6
goto HMGD
(6)
VMD2 989delGAT GAG GAT GAT GAT GAT TTT>GAG ___ GAT GAT GAT TTT 0989 08
Conserved in RFP proteins
goto HMGD
(7)
VMD2 Asp 301 Glu GAT>GAG 0991 08

G, B-1, B-16
goto HMGD
(3)
VMD2 Asp 302 His GAT>CAT 0992 08


C


(9)
VMD2 Asp 302 Val GAT>GTT 0993 08


goto HMGD
(7)
VMD2 Asp 302 Gly GAT>GGT 0993 08


goto HMGD
(7)
VMD2 Asp 303 Glu GAT>GAA 0997 08


A


(9)
VMD2 Phe 305 Ser TTT>TCT 1002 08

F
Great Britain
goto HMGD
(10)
VMD2 Glu 306 Gly GAG>GGG 1005 08
Conserved in RFP proteins
goto HMGD
(7)
VMD2 Glu 306 Asp GAG>GAC 1006 08
Conserved in RFP proteins
goto HMGD
(7)
VMD2 Thr 307 Ala ACC>GCC 1007 08


goto HMGD
(7)
VMD2 Thr 307 Ile ACC>ATC 1008 08

H
goto HMGD
(7)
(3)
VMD2 Asn 308 His AAC>AGC 1011 08


B


(9)
VMD2 Ile 310 Thr ATT>ACT 1017 08


B-6
German
goto HMGD
(6)
VMD2 Val 311 Gly GTG>GGC 1020 08


B-5, B-7
German
goto HMGD
(6)
VMD2 1556delCA CTT CAC AGT>CTT __C AGT 1556 10

I
goto HMGD
(3)
AMD Arg 105 Cys CGC>TGC 0401 04


goto HMGD
(7)
AMD Glu 119 Gln GAG>CAG 0443 04


goto HMGD 607854-000008 (7)
(14)
(1)
AMD Lys 149 ter AAG>TAG 0533 04


goto HMGD
(7)
AMD Thr 216 Ile ACC>ATC 0735 06



goto HMGD
(1)
AMD Val 275 Ile GTC>ATC 0911 07


goto HMGD
(7)
AMD Leu 567 Phe CTC>TTC 1787 10





(1)
(14)
AVMD Thr 6 Pro ACA>CCA 0104 02

A21
German
goto HMGD 607854-000005 (6)
AVMD Arg 47 His CGC>CAC 0228 02


A-27
German
goto HMGD 607854-000011 (6)
AVMD Ala 146 Lys GCA>AAA 0524 04



goto HMGD 607854-000001 (1)
(14)
AVMD Ala 243 Val GCG>GTG 0816 07


B-10, A-13, A-18, A-36, A-37
German
goto HMGD
(6)
AVMD Asp 312 Asn GAC>AAC 1022 08


A-3
German
goto HMGD
(6)
Bull's Eye Maculopathy Glu 119 Gln GAG>CAG 0443 04

Caucasian
goto HMGD 607854-000008 (1)
(14)
Drusen Thr 216 Ile ACC>ATC 0735 06



goto HMGD
(14)
Drusen Leu 567 Phe CTC>TTC 1787 10



goto HMGD
(14)
Polymoprhism Val 311 Val GTC>GTT 1021 08





(6)
Polymorphism 33C/T GACCC>GATCC 0033 01
Reported as -118c/t



(1)
Polymorphism -70t/c ctcac>cttac -0070 5'UTR
Reported as -221t/c, -118t/c German

(10)
(6)
(1)
Polymorphism Tyr 29 Tyr TAC>TAT 0175 02





(3)
Polymorphism Leu 37 Leu TTA>CTA 0197 02

SL3, Nx3, Ge, Gi, De, Em, Mi, B, C
German, Swedish


(12)
(10)
(9)
Polymorphism Thr 55 Thr ACG>ACA 0253 03




(7)
Polymorphism Leu 67 Leu CTG>CTC 0289 03





(1)
Polymorphism Ile 73 Ile ATC>ATA 0307 03

Ge, Gi, Sc, Ti


(7)
(8)
(1)
(3)
Polymorphism Gln 74 Gln GAA>AAA 0310 03





(1)
Polymorphism IVS3-12c/t cccct>cctct 0336 IVS3


German


(5)
Polymorphism IVS3-32c/t ccctc>ccttc 0336 IVS3


German


(5)
Polymorphism IVS3-17c/t ccccg>cctcg 0336 IVS3


German


(5)
Polymorphism IVS3-26c/t cccct>cctct 0336 IVS3


German


(5)
Polymorphism IVS4-24c/t accgc>actgc 0570 IVS4

SG1, Dx1


(12)
(1)
(6)
Polymorphism Leu 206 Leu CTG>CTN 0706 05




(7)
Polymorphism Gln 208 Gln CAG>CAA 0712 05


German


(5)
Polymorphism IVS5-6c/t ccccc>cctcc 0725 IVS5




(7)
Polymorphism Arg 218 Arg CGT>TGT 0742 06

Dx1


(12)
Polymorphism Ile 232 Ile ATC>ATA 0784 06




(7)
(1)
Polymorphism IVS6-27del(TCC)3 acatc ctcct cctcc tcctc ctcct cccag>aca__ _____ __tcc tcctc ctcct cccag 0803 IVS6




(10)
(6)
(9)
Polymorphism IVS6-27insTCC acatc ctcct cctcc tcctc ctcct cccag>acatc ctcct cctcc tcctc ctcct cctcc cag 0803 IVS6




(1)
Polymorphism IVS6-27del(TCC)2 acatc ctcct cctcc tcctc ctcct cccag>aca__ ____t cctcc tcctc ctcct cccag 0803 IVS6




(1)
Polymorphism Val 240 Val GTG>GTC 0808 07


German


(5)
Polymorphism IVS8-21del t cttct>ct_ct 1037 IVS8




(7)
Polymorphism Pro 341 Pro CCC>CCT 1111 09

SL76
German


(12)
(1)
(6)
Polymorphism Glu 342 Glu GAG>GAA 1114 09





(1)
Polymorphism Thr 470 Thr ACA>ACG 1498 10

Nx3, SL1, S1, SL76, Sch, Em, Ge, A, B, C
German, Swedish


(12)
(10)
(6)
(1)
(8)
(3)
(9)
Polymorphism Ser 519 Ser AGC>AGT 1645 10

S1, SL2, SL3, SL76
German, Swedish


(12)
(10)
(1)
Polymorphism Glu 525 Ala GAG>GCG 1662 10





(1)
Polymorphism Thr 536 Thr ACT>ACC 1696 10

Dx1, SL1, SL2, SL3, SL76, Sch, Ge
German, Swedish


(12)
(10)
(1)
(8)
(3)
Polymorphism Glu 557 Lys GAA>AAA 1757 10
Homozygous control



(1)
Polymorphism Thr 561 Ala GAA>AAA 1769 10



goto HMGD
(1)
Polymorphism Glu 578 Val GAA>GTA 1820 10




(10)
Polymorphism IVS10-27t/c tatgc>tacgc 1828 IVS10





(1)
Polymorphism 1935ins g ctgtc>ctggtc 1935 3'UTR





(1)
Polymorphism 1979t/c ggtta>ggcta 1979 3'UTR





(1)
Polymorphism 2062t/c cattg>cactg 2062 3'UTR





(1)

References

  1. Allikmets,R., Seddon,J.M., Bernstein,P.S., Hutchinson,A., Atkinson,A., Sharma,S., Gerrard,B., Li,W., Metzker,M.L., Wadelius,C., Caskey,C.T., Dean,M., and Petrukhin,K. Evaluation of the Best disease gene in patients with age-related macular degeneration and other maculopathies. 1999; Hum.Genet. 104: 449-453.
    Link to PubMed
    Goto Top
  2. Bakall,B., Marknell,T., Ingvast,S., Koisti,M.J., Sandgren,O., Li,W., Bergen,A.A., Andreasson,S., Rosenberg,T., Petrukhin,K., and Wadelius,C. The mutation spectrum of the bestrophin protein--functional implications. 1999; Hum.Genet. 104: 383-389.
    Link to PubMed
    Goto Top
  3. Caldwell,G.M., Kakuk,L.E., Griesinger,I.B., Simpson,S.A., Nowak,N.J., Small,K.W., Maumenee,I.H., Rosenfeld,P.J., Sieving,P.A., Shows,T.B., and Ayyagari,R. Bestrophin gene mutations in patients with Best vitelliform macular dystrophy. 1999; Genomics. 58: 98-101.
    Link to PubMed
    Goto Top
  4. Eksandh,L., Bakall,B., Bauer,B., Wadelius,C., and Andreasson,S. Best's vitelliform macular dystrophy caused by a new mutation (Val89Ala) in the VMD2 gene. 2001; Ophthalm.Genet. 22: 107-115.
    Link to PubMed
    Goto Top
  5. Krämer,F., Mohr,N., Kellner,U., Rudolph,G., and Weber,B.H. Ten novel mutations in VMD2 associated with Best macular dystrophy (BMD). 2003; Hum Mutat. 22: 418
    Goto Top
  6. Krämer,F., White,K., Pauleikhoff,D., Gehrig,A., Passmore,L., Rivera,A., Rudolph,G., Kellner,U., Andrassi,M., Lorenz,B., Rohrschneider,K., Blankenagel,A., Jurklies,B., Schilling,H., Schutt,F., Holz,F.G., and Weber,B.H. Mutations in the VMD2 gene are associated with juvenile-onset vitelliform macular dystrophy (Best disease) and adult vitelliform macular dystrophy but not age-related macular degeneration. 2000; Eur.J.Hum.Genet. 8: 286-292.
    Link to PubMed
    Goto Top
  7. Lotery,A.J., Munier,F.L., Fishman,G.A., Weleber,R.G., Jacobson,S.G., Affatigato,L.M., Nichols,B.E., Schorderet,D.F., Sheffield,V.C., and Stone,E.M. Allelic variation in the VMD2 gene in best disease and age- related macular degeneration. 2000; Invest.Ophthalmol.Vis.Sci. 41: 1291-1296.
    Link to PubMed
    Goto Top
  8. Marchant,D., Gogat,K., Boutboul,S., Pequignot,M., Sternberg,C., Dureau,P., Roche,O., Uteza,Y., Hache,J.C., Puech,B., Puech,V., Dumur,V., Mouillon,M., Munier,F.L., Schorderet,D.F., Marsac,C., Dufier,J.L., and Abitbol,M. Identification of novel VMD2 gene mutations in patients with best vitelliform macular dystrophy. 2001; Hum.Mutat. 17: 235
    Link to PubMed
    Goto Top
  9. Marchant,D., Gogat,K., Dureau,P., Sainton,K., Sternberg,C., Gadin,S., Dollfus,H., Brasseur,G., Hache,J.C., Dumur,V., Puech,V., Munier,F., Schorderet,D.F., Marsac,C., Menasche,M., Dufier,J.L., and Abitbol,M. Use of denaturing HPLC and automated sequencing to screen the VMD2 gene for mutations associated with Best's vitelliform macular dystrophy. 2002; Ophthalmic Genet. 23: 167-174.
    Goto Top
  10. Marquardt,A., Stohr,H., Passmore,L.A., Krämer,F., Rivera,A., Weber,B.H.F., and Weber,B.H. Mutations in a novel gene, VMD2, encoding a protein of unknown properties cause juvenile-onset vitelliform macular dystrophy (Bests-Disease). 1998; Hum.Mol.Genet. 7: 1517-1525.
    Goto Top
  11. Palomba,G., Rozzo,C., Angius,A., Pierrottet,C.O., Orzalesi,N., and Pirastu,M. A novel spontaneous missense mutation in VMD2 gene is a cause of a best macular dystrophy sporadic case. 2000; Am.J.Ophthalmol. 129: 260-262.
    Goto Top
  12. Petrukhin,K., Koisti,M.J., Bakall,B., Li,W., Xie,G., Marknell,T., Sandgren,O., Forsman,K., Holmgren,G., Andreasson,S., Vujic,M., Bergen,A.A., McGarty Dugan,V., Figueroa,D., Austin,C.P., Metzker,M.L., Caskey,C.T., and Wadelius,C. Identification of the gene responsible for Best macular dystrophy. 1998; Nat.Genet. 19: 241-247.
    Goto Top
  13. Ponjavic,V., Eksandh,L., Andreasson,S., Sjostrom,K., Bakall,C., Ingvast,S., Wadelius,C., and Ehinger,B. Clinical expression of Best's vitelliform macular dystrophy in Swedish families with mutations in the bestrophin gene. 1999; Ophthalm.Genet. 20: 251-257.
    Link to PubMed
    Goto Top
  14. Seddon,J.M., Afshari,M.A., Sharma,S., Bernstein,P.S., Chong,S., Hutchinson,A., Petrukhin,K., and Allikmets,R. Assessment of mutations in the Best macular dystrophy (VMD2) gene in patients with adult-onset foveomacular vitelliform dystrophy, age-related maculopathy, and bull's-eye maculopathy. 2001; Ophthalmology. 108: 2060-2067.
    Link to PubMed
    Goto Top
  15. Yanagi,Y., Sekine,H., and Mori,M. Identification of a novel VMD2 mutation in Japanese patients with Best disease. 2002; Ophthalmic Genet. 23: 129-133.
    Goto Top

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This site is maintained and edited by
Dr. rer. medic. Markus Preising, Dipl.Biol.
Molecular Genetics Laboratory
Department of Pediatric Ophthalmology, Strabismology and Ophthalmogenetics
University of Regensburg
Head: Prof. Dr. med. Birgit Lorenz