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Mutation Database
Mutations of the ATP-binding Cassette Transporter Retina
(ABCR, ABCA4)

Recent update from: 12.12.2004
Here we report a collection of currently published ABCR/ABCA4 mutations. Papers by Cremers et al., Lewis et al., and Maugeri et al. report a dependance of severity of disease on the mutations combined. It should be noted that the involvement of ABCR/ABCA4 mutations in AMD is still under heavy dispute. At least it appears that ABCR/ABCA4 is a factor involved in AMD. The combination with other, yet not discovered, factors makes certain mutations to appear associated with AMD in certain reports while their involvement is strictly negated in others. Therefore, the disease association of the mutations given below is given as reported by the authors and no further evaluation is made. The same is done concerning mutations reported to cause Retinitis Pigmentosa.
Phenotype Mutation Basechange Nucleotide Exon Restriction Site Classification
& Remarks
Mutation Database OMIM Reference

Bold indicates mutations that could not be corrrelated to the published sequences










Microarray indicates unpublished mutations Italics indicates mutations spotted on a mutation detection microarray



nd = not determined





Sequence


0
The sequence data are adjusted to a sequence given in a WORD file which can be downloaded here. Nucleotides are counted from the transcription start site as used in most of the recent publications of ABCR mutations.





AMD Arg 212 Cys CGC>TGC 0634 06


goto HGMD
(42)

AMD IVS6-5t/g attac>atgac 0769 IVS06






AMD Glu 471 Lys GAA>AAA 1411 11 -MboII

goto HGMD
(2)
(43)
(7)

AMD Gly 818 Glu GGG>GGA 2453 16


goto HGMD
(3)

AMD 2588G>C =
Gly 863 Ala
GGA>GCA 2588 17


goto HGMD 601691-0001 (3)
(30)
(40)
(43)

AMD 2884delC TTC CTG>TTC _TG 2884 19


goto HGMD
(43)

AMD Ala 1038 Val GCC>GTC 3113 21 -SfaI

goto HGMD 601691-0003 (43)

AMD Arg 1129 Leu CGC>CTC 3385 23


goto HGMD
(2)

AMD Thr 1428 Met ACG>ATG 4283 29


goto HGMD
(2)
(41)
(7)

AMD Val 1433 Ile GTC>ATC 4297 29


goto HGMD
(41)
(43)

AMD Arg 1517 Ser CGC>AGC 4549 31


goto HGMD
(2)
(7)

AMD Ile 1562 Thr ATT>ACT 4685 33


goto HGMD
(2)
(7)

AMD Thr 1572 Met ACG>TCG 4714 33




(42)

AMD Gly 1578 Arg GGG>AGG 4732 33


goto HGMD
(2)
(7)

AMD IVS33+1g>t GG gta>GG tta 4773 IVS33




(42)

AMD IVS36+1g>a ATC gtaag>ATC ataag 5196 36
Non functional protein
goto HGMD
(4)
(2)

AMD Arg 1898 His CGC>CAC 5693 40


goto HGMD
(2)
(7)

AMD Gly 1961 Glu GGA>GAA 5882 42 -Hpy188I

goto HGMD 601691-0007 (2)
(1)
(43)
(7)

AMD Leu 1970 Phe CTC>TTC 5908 43


goto HGMD
(2)
(43)
(7)

AMD Val 2050 Leu GTT>CTT 6148 45
No splicing effect
goto HGMD 601691-0005 (4)
(43)

AMD Ile 2166 Met ATC>ATG 6498 48




(42)

AMD 6519del11bp TCC CCG AAG GAC GAC CTG>TCC ___ ___ ___ ___ CTG 6519 48


goto HGMD
(2)
(7)

AMD Asp 2177 Asn GAC>AAC 6529 48
Rare polymorphism?
goto HGMD 601691-0006 (2)
(1)
(10)
(43)
(7)

AMD 6568delC TTC CAG>TTC _AG 6568 48


goto HGMD
(2)
(7)

AMD excluded Val 1433 Ile GTC>ATC 4297 29




(35)

AMD uncertain involvement Leu 1970 Phe CTC>TTC 5908 43




(35)

AMD/Variant Pro 862 Leu CCA>CTA 2585 16




(10)

arCRD Arg 2030 ter CGA>TGA 6088 44
Compound:
  • single
032-063
032-093
goto HGMD
(25)
(8)
(28)

arCRD Cys 2150 Tyr TGT>TAT 6449 47


goto HGMD
(25)

ARRP IVS7-45_952del ins tctgacc
0859 IVS07
Homozyous
Compound
  • IVS12+2t>g
  • 1894delA
      Japanese


(13)

ARRP IVS12+2t>g gtgat>gggat 1762 IVS12
Homozyous
Compound
  • IVS7-45-952del ins tctgacc
  • 1894delA
      Japanese


(13)

ARRP 1847delA GAA CAG>GA_ CAG 1847 13


goto HGMD 601691-0008 (22)

ARRP 2588G>C =
Gly 863 Ala
GGA>GCA 2588 17
Compound:
  • 5888delG
  • in cis R943Q
9304
goto HGMD
(18)

ARRP Arg 943 Gln CGG>GGG 2827 19 -MspI Compound:
  • 5888delG
  • in cis: 2588G>C
9304
goto HGMD
(19)

ARRP IVS23-28t>c cttgt>ctcgt 3523 IVS23
Homozygous


(22)

ARRP IVS30+1g>t AG gta>AG ata 4539 IVS30
Homozygous
goto HGMD 601691-0009 (9)

ARRP IVS33+48c>t aacta>aatta 4773 IVS33

AR682-03


(30)

ARRP IVS39-70c>t ccttc>ctttg 5585 IVS39

AR682-03


(30)
(11)

ARRP IVS40+34c>t agctc>agttc 5714 IVS40 -HaeIII Homozygous


(22)
(14)

ARRP Gly 1961 Glu GGA>GAA 5882 42 -Hpy188I
STGD-A and B
goto HGMD
(27)

ARRP 5888delG CGC CCT>C_C CCT 5888 42
Compound
  • 2588G>C
  • R943Q 9304


(19)

ARRP 5917delG GGA GTG>GGA _TG 5917 43


Null mutation


(27)

ARRP Asp 2177 Asn GAC>AAC 6529 48
Compound
  • single
9444
9445
goto HGMD 601691-0006 (19)

CRD Arg 18 Trp CGG>TGG 0052 01
Homozygous
Compound:
  • R24C 15429
goto HGMD
(19)

CRD Arg 24 Cys CGC>TGC 0070 02




(19)

CRD Gly 65 Glu GGA>GAA 0194 03
Compound:
  • L541P/A1038V
  • 768G>C
9250
16583
goto HGMD
(17)
(19)

CRD 250insCAAA insCAAA 0250 03
Compound:
  • IVS36+1g>a
Null mutation 035-002


(8)
(14)

CRD Glu 161 Lys GAA>AAA 0481 05
Compound
  • P597S
  • in cis:A1794D
16243


(19)

CRD Arg 212 Cys CGC>TGC 0634 06
Compound:
  • nd

goto HGMD
(17)

CRD Val 256 Val GTG>GTT 0768 06
Heterozygous
Compound:
  • single

Splice Site Mutation 9378
16538
16887
17906


(17)
klevering2004a

CRD Lys 356 ter AAG>TAG 1066 08
Compound:
  • 4538insC

Null mutation 035-066


(8)

CRD Leu 541 Pro CTA>CCA 1622 12 -TspRI Homozygous
Compound:
  • single
  • G65E
  • C1490Y
  • IVS38-10t>c
  • V767D
  • In cis A1038V
9250
9303
9370
9371
9633
13163
14488
14752
15428
16242
16528
goto HGMD
(17)
(19)

CRD Pro 597 Ser CCC>TCC 1789 13
Compound
  • A1794D+E161K+E1087K
16243


(19)

CRD Gly 618 Glu GGG>GAG 1853 13
Compound
  • in cis V1433I
  • 2588G>C+R948Q
16697


(19)

CRD Val 767 Asp GTC>GAC 2300 15 +Tsp45I Compound:
  • L541P
  • A1038V
032-042
071-006
AR682-04


(19)

CRD 2588G>C =
Gly 863 Ala
GGA>GCA 2588 17
Homozygous
Compound:
  • single
  • IVS35-2-5020del4bp
  • C1490Y
  • G618E+V1433I
  • in cis: R943Q
9553
15730
16697
16755
goto HGMD 601691-0001 (17)

CRD IVS16-12c>g gtctc>gtgtc 2588 IVS16




(5)

CRD Arg 943 Gln CGG/GGG 2827 19 -MspI Homozygous
Compound:
  • single
  • G618E+V1433I
  • in cis: 2588G>C
15730
16755
16697
goto HGMD
(19)

CRD Glu 1029 ter CAG>TAG 3085 21
Heterozygous
Compound:
  • IVS30+1g>t

      10125


(17)

CRD Ala 1038 Val GCC>GTC 3113 21 -SfaI Previous: A1028V

Homozygous Heterozygous
Compound:
  • G65E
  • C1490Y
  • IVS10-38t>c
  • V767D
In cis:
  • L541P
9250
9303
9370
9371
9633
13163
14488
14752
15428
16242
16528
goto HGMD 601691-0003 (17)
(19)

CRD Glu 1087 Lys GAA>AAA 3259 22
Compound:
  • single
STGD-C 16569
goto HGMD
(19)

CRD Glu 1122 Lys GAG>AAG 3364 23
Heterozygous Compound:
  • single
9650
goto HGMD
(17)

CRD IVS26+1g>a GG gta>GG ata 3862 IVS26
Compound:
  • 4034insCA

Null mutation 007-014


(8)

CRD 4035insCA AAC ACG>AAC ACA CG 4035 27
Compound:
  • IVS26+1g>a

Null mutation 007-014


(8)

CRD Val 1433 Ile GTC>ATC 4297 29
Compound
  • 2588G>C+R943Q
  • in cis: G618E
16697
goto HGMD
(19)

CRD Cys 1490 Tyr TGC>TAC 4469 30
Heterozygous
Compound:
  • single
  • L541P/A1038V

      9378


(17)

CRD 4538insC CCG CCC CCC CAG gt>CCG CCC CCC CAC G gt 4538 30 +BslI Compound:
  • L356X

Null mutation 032-066


(8)

CRD IVS30+1g>t AG gta>AG ata 4539 IVS30
Compound:
  • Q1029X
10125
goto HGMD 601691-0009 (17)

CRD Ile 1562 Thr ATT>ACT 4684 33




(5)

CRD Arg 1640 Gln CGG>CAG 4918 35
Homozygous
Missense 032-030


(8)

CRD Arg 1640 Trp CGG>TGG 4918 35
Compound:
    G1961E
14750


(5)
(33)
(25)
(19)

CRD IVS35-2-5020del4bp tgcag G CTG>tgc__ _ _TG 5019 IVS35
Compound:
  • 2588G>C
9553
goto HGMD 601691-0001 (17)

CRD IVS36+2t>c ATC gtaag>ATC gcaag 5196 IVS36
Compound:
  • IVS40+5G>A
Non functional protein 15105


(19)

CRD IVS36+1g>a ATC gtaag>ATC ataag 5196 IVS36
Compound:
  • 250insCAAA
  • L541P/A1038V

Null mutation 035-002
13163


(8)
(17)
(7)

CRD Ala 1794 Asp GCT>GAT 5381 38
Compound
  • P597S
  • in cis:E161K
16243
goto HGMD
(19)

CRD IVS38-10t/c tctct/tccct 5461 IVS38
Homozygous
Compound:
  • L541P+A1038V
  • 768G>T
120608
16887
16582


(19)

CRD IVS40+5g>a acgtc>acatc 5714 IVS40 +FokI Compound:
  • IVS30+1g>t
  • IVS36+2t>c
Partionally functioning splice site 15105
goto HGMD 601691-0010 (4)
(9)
(19)

CRD Gly 1961 Glu GGA>GAA 5882 42 -Hpy188I Compound:
  • single
STGD-A and B 15680
goto HGMD
(19)

CRD 5917delG GGA GTG>GGA _TG 5917 43
Homozygous
Null mutation 032-081


(8)

CRD Leu 2027 Phe CTC>TTC 6079 44


goto HGMD
(5)

CRD 6601delAG GAG AGG>GAG __G 6601 48
Heterozygous
Compound:
  • single
9369
goto HGMD 601691-0003 (17)

FFM Arg 152 ter CGA>TGA 0455 05


Null mutation


(34)

Microarray Leu 11 Pro CTC>CCC 0045 01






Microarray Trp 41 ter TGG>TAG 0122 02






Microarray Cys 54 Phe CGC>CTC 0161 03






Microarray Ala 60 Thr GCG>ACG 0178 03






Microarray Pro 68 Leu CCG>CTG 0203 03






Microarray Gly 72 Arg GGG>AGG 0214 03






Microarray Asn 96 Lys AAC>AA(A/G) 0288 03






Microarray 296insA AAC AAC>AAC AAA C 0296 03






Microarray IVS3+1g>a AT gtaag>AT ataag 0302 IVS03






Microarray 666del13bp GGG GCA AAG ACG GTG CGC TAT>GGG GC_ ___ ___ ___ ___ TAT 0666 06






Microarray 667del12bp GCA AAG ACG GTG CGC TAT>GCA ___ ___ ___ ___ TAT 0667 06






Microarray 667del14bp GCA AAG ACG GTG CGC TAT GCC>GCA ___ ___ ___ ___ __T GCC 0667 06






Microarray 671delC AAG A_G GTG>AAG A_G GTG 0671 06






Microarray 730delCT ACT CTG TAT>ACT __G TAT 0730 06






Microarray Asn 247 Ile AAC>ATC 0740 06






Microarray Asn 247 Ser AAC>AGC 0740 06






Microarray Arg 255 Cys CGT>GGT 0763 06






Microarray Glu 328 ter GAG>TAG 0982 08






Microarray Glu 328 Val GAG>GTG 0983 08






Microarray Trp 339 Gly TGG>GGG 1015 08






Microarray 1025del14bp GAA GAC AAT AAC TAT AAG GCC>GAA G__ ___ ___ ___ ___ GCC 1025 08






Microarray Lys 346 ter AAG>TAG 1036 08






Microarray Lys 346 Thr AAG>ACG 1037 08






Microarray Tyr 362 ter TAT>TAG 1086 08






Microarray His 423 Pro CAC>CCC 1268 10






Microarray Trp 439 ter TGG>TGA 1317 10






Microarray Phe 442 Ser TTT>TCT 1325 10






Microarray 1506del9bp ATA TTT AAC ATC>AT_ ___ ___ __C 1506 11






Microarray IVS11+1g>a GAG T gtaag>GAG T ataag 1555 IVS11






Microarray IVS11-1g>a tgcag GC>tgcaa GC 1556 IVS11






Microarray Arg 537 His CGT>CAT 1610 12






Microarray Phe 553 Leu TTC>TTG 1659 12






Microarray Asp 600 Tyr GAT>TAT 1798 13






Microarray Phe 608 Leu TTT>CTT 1822 13






Microarray Phe 608 Tyr TTT>TAT 1823 13






Microarray Gln 635 Lys CAG>AAG 1903 13






Microarray Gln 636 His CAG>CAT 1908 13






Microarray Tyr 639 Tyr TAC>TAT 1917 13






Microarray IVS13+1g>a GAT T gtgag>GAT T atgag 1936 IVS13






Microarray Leu 686 Ser TTG>TCG 2057 14






Microarray 2292delT GCC TGT AGT>GCC TG_ AGT 2292 15






Microarray Ser 765 Arg AGT>AGG 2295 15






Microarray 2409delAT GGA TTT>GG_ _TT 2409 16






Microarray Trp 855 ter TGG>TAG 2564 16






Microarray 2570delT TAC CTT>TAC C_T 2570 16






Microarray 2616delCT TAC TTT>TA_ _TT 2616 17






Microarray Thr 901 Thr ACA>ACT 2703 18






Microarray 2826delC GGC CGG>GG_ CGG 2826 19






Microarray Thr 959 Ile ACC>ATC 2876 19






Microarray 2886delG CTG GGC>CT_ GGC 2886 19






Microarray Thr 983 Ile ACC>ATC 2948 20






Microarray Gly 991 Arg GGA>CGA 2971 20






Microarray Arg 1055 Trp CGG>TGG 3163 21






Microarray Ser 1063 Pro TCA>CCA 3187 21






Microarray IVS21+1g>t TCA G gtgct>TCA G ttgct 3190 IVS21






Microarray IVS21-2a>g tccag GT>tccgg GT 3191 IVS21






Microarray Glu 1087 Asp GAA>GAC 3261 22






Microarray Gly 1091 Glu GGG>GAG 3272 22






Microarray Asp 1093 Gly GAC>GGC 3278 22






Microarray Trp 1101 ter TGG>TGA 3303 22






Microarray Arg 1108 Leu CGC>CTC 3323 22






Microarray 3438delC TTC CTG>TT_ CTG 3438 23






Microarray 3528insTGCA ACG TGC AGC>ACG TGC ATG CAG C 3528 24






Microarray IVS24+1g>a GAT G gtaag>GAT G ataag 3607 IVS24






Microarray Asn 1235 Asp AAT>GAT 3703 25






Microarray Glu 1252 ter GAG>TAG 3754 25






Microarray Thr 1253 Met ACG>ATG 3758 25






Microarray Glu 1270 ter GAA>TAA 3808 25






Microarray 3815insT gacag ATT TTT CTG>gacag ATT TTT TCT G 3815 26






Microarray IVS26+1g>a GAG gtaaa>GAG ataaa 3862 IVS26






Microarray Gln 1292 ter CAG>TAG 3874 27






Microarray Arg 1300 ter CGA>TGA 3898 27






Microarray Gln 1332 ter CAG>TAG 3994 27






Microarray Leu 1358 Pro CTG>CCG 4073 27






Microarray Leu 1390 Pro CTT>CCT 4169 28






Microarray IVS28-2a>g tctag C ATG>tctgg C ATG 4254 IVS28






Microarray Leu 1430 Pro CTT>CCT 4286 29






Microarray Phe 1440 Val TTT>GTT 4318 29






Microarray Gly 1448 Arg GGG>A/CGG 4342 29






Microarray Trp 1479 ter TGG>TAG 4436 30






Microarray Cys 1488 Tyr TGC>TAC 4463 30






Microarray Gly 1508 Cys CGC>TGC 4522 30






Microarray IVS30-2a>g ctcag AGA>ctcgg AGA 4540 IVS30






Microarray IVS32+2t>c AG gtaag>AG gcaag 4667 IVS32






Microarray 4707delC GTC CCC ATC>GT_ CCC ATC 4707 33






Microarray Gly 1591 Arg GGG>A/CGG 4771 33






Microarray IVS33+2t>c GGG gtatg>GGG gcatg 4773 IVS33






Microarray 4838delA GAA GAC AAC>GAA G_C AAC 4838 34






Microarray Trp 1618 ter TGG>TGA 4854 35






Microarray His 1625 Gln CAT>CAA 4875 35






Microarray Ser 1642 Arg AGC>AGG 4926 35






Microarray Gln 1667 Lys CAG>AAG 4999 35






Microarray IVS35+2t>a GT gtaag>GT gaaag 5018 IVS35






Microarray Val 1686 Met GTG>ATG 5056 36






Microarray Ser 1689 Pro TCC>CCC 5065 36






Microarray Arg 1705 Leu CGG>CTG 5114 36






Microarray 5160delCA AGC CCC ACC>AGC CC_ _CC 5160 36






Microarray IVS36+1del4bp ATC gtaag>ATC ____g 5196 IVS36






Microarray IVS36+1del6bp ATC gtaag tgtca>ATC _____ _gtca 5196 IVS36






Microarray IVS36+2t>g ATC gtaag>ATC ggaag 5196 IVS36






Microarray Gly 1748 Arg GGG>AGG 5242 37






Microarray Gln 1750 ter CAG>TAG 5248 37






Microarray 5278del9bp AAC CTT CCT GCC CTT>AAC ___ ___ ___ CTT 5278 37






Microarray Leu 1763 Pro CTT>CCT 5288 37






Microarray Tyr 1779 ter TAC>TAA 5337 38






Microarray Asn 1805 Asp AAC>GAC 5413 38






Microarray IVS38+1g>a CGG gtgag>CGG atgag 5460 IVS38






Microarray His 1838 Asp CAC>GAC 5512 39






Microarray IVS39-10t>c gt tga>gt cga 5585 IVS39






Microarray Glu 1885 Lys GAA>AAA 5653 40






Microarray Val 1921 Met GTG>ATG 5761 41






Microarray Leu 1940 Pro CTA>CCA 5819 41






Microarray Pro 1948 Leu CTA>CCA 5819 41






Microarray Leu 1971 Arg CTG>CGG 5912 43






Microarray Gly 1972 Arg GGA>AGA 5914 43






Microarray Gly 1975 Arg GGT>CGT 5923 43






Microarray Thr 1979 Ile ACA>ATA 5936 43






Microarray Arg 2040 ter CGA>TGA 6118 44






Microarray Leu 2060 Arg CTG>CGG 6179 45






Microarray Ala 2064 Pro GCC>CCC 6190 45






Microarray Arg 2077 Gly CGG>GGG 6229 45






Microarray 6238delTC CTC TCC>C__ TCC 6238 45






Microarray Val 2029 Val GTG>GTA 6276 45






Microarray Arg 2107 Pro CGC>CCC 6320 46






Microarray Trp 2110 ter TGG>TAG 6329 46






Microarray IVS46+2c>g AG gcaag>AG ggaag 6386 46






Microarray Gly 2146 Asp GGC>GAC 6437 47






Microarray Tyr 2203 ter TAC>TAA 6609 48






Microarray Gln 2220 ter CAG>TAG 6658 48






Microarray 6710insA GTC ACA>GTC AAC A 6710 48






Microarray Ala 2271 Ala GCC>GCT 6813 49






Polymorphism Pro 47 Pro CCG/CCA 0141 02




(8)

Polymorphism IVS2-19g/a g/a 0161 IVS02




(43)

Polymorphism IVS2-45t/g t/g 0161 IVS02




(43)

Polymorphism Asn 78 Asn AAT/AAC 0234 02




(43)

Polymorphism IVS3+20c/t tacca/tatca 0302 IVS03




(8)
(43)
(14)

Polymorphism IVS3+26a/g gcagg/gcggg 0302 IVS03

AR682-04


(8)
(30)
(43)
(14)

Polymorphism IVS3+92a/g gcact/gcgct 0302 IVS03




(8)

Polymorphism IVS3-71del a aaata/aa_ta 0303 IVS03




(8)

Polymorphism IVS5-29g/t cagtt/cattt 0571 IVS05




(14)

Polymorphism Arg 212 His CGC/CAC 0635 06 -CfoI
-HgiAI




(33)
(8)
(43)
(14)
(16)

Polymorphism IVS6-32t/c tatat/tacat 0769 IVS06




(8)
(43)
(14)

Polymorphism IVS7-11c/t tgctc/tgtct 0859 IVS07




(43)

Polymorphism Pro 291 Pro CCG/CCA 0873 08




(43)

Polymorphism Glu 310 Gln GAG>CAG 0928 08





(28)

Polymorphism Thr 311 Thr ACC/ACT 0933 08




(8)

Polymorphism Pro 327 Pro CCC/CCT 0981 08




(43)

Polymorphism Gly 330 Asp GGT>GAT 0989 08





(28)

Polymorphism IVS8-14t/c ccttg/ccctg 1100 IVS08




(43)

Polymorphism IVS9-14c/t ctttg/ctctg 1240 IVS09




(8)
(43)

Polymorphism Ser 416 Ser TCA/TCC 1248 10




(43)

Polymorphism His 423 Arg CAC/CGC 1268 10
Heterozygous AR682-04

(30)

Polymorphism His 423 His CAC/CAT 1269 10




(43)

Polymorphism IVS10+11del g ggggg/gg_gg 1356 IVS10

AR682-04


(25)
(8)
(30)

Polymorphism IVS10+6ins c ggggg/ggcggg 1356 IVS10




(8)

Polymorphism IVS10+6g/c agggg/agcgg 1356 IVS10




(43)

Polymorphism IVS10+5del g aaggg/aa_gg 1356 IVS10




(43)

Polymorphism Leu 541 Leu CTA/CTG 1623 12




(43)

Polymorphism Val 551 Val GTG/GTA 1653 12




(43)

Polymorphism IVS12+22g/t tcgct/tctct 1762 IVS12




(43)

Polymorphism IVS12-37g/a aagcc/aaacc 1763 IVS12




(43)

Polymorphism IVS12-50g/a gagtg/gaatg 1763 IVS12




(43)

Polymorphism IVS12-54g/a gtgtg/gtatg 1763 IVS12




(43)

Polymorphism IVS12-50g/a cggga>cgaga 1763 IVS12

Japanese


(13)

Polymorphism Ala 626 Ala GCG/GCA 1878 13




(8)

Polymorphism Val 643 Gly GTG/GGG 1928 13




(2)

Polymorphism Ser 709 Ser TCG/TCA 2127 14




(43)

Polymorphism IVS15-10c/g gcctc/gcgtc 2383 IVS15




(43)

Polymorphism Asp 846 His GAT/CAT 2536 16
Compound:
  • R943Q

goto HGMD
(2)

Polymorphism IVS16-12c/g gtctc/gtgtc 2588 IVS16




(43)

Polymorphism 2588G>C =
Gly 863 Ala
GGA/GCA 2588 17


goto HGMD
(2)

Polymorphism IVS17+60g/c aagat/aacat 2652 IVS17




(43)

Polymorphism IVS17-21a/t acact/actct 2653 IVS17




(43)

Polymorphism IVS17-48g/c tcgtt/tcctt 2653 IVS17




(43)

Polymorphism IVS17-36g/t ccggt/cctgt 2653 IVS17




(14)

Polymorphism Thr 901 Ala ACA/GCA 2701 18




(37)
(10)
(43)

Polymorphism IVS18-38del c gccat/gc_at 2744 IVS18
Homozygous in all individuals tested


(11)
(28)

Polymorphism IVS18-56g/a tgggg/taggg 2744 IVS18




(43)

Polymorphism Arg 943 Gln CGG/GGG 2827 19 -MspI Compound:
  • D846H
  • W1408R
  • R1640W
  • V767D
AR682-03
goto HGMD
(2)
(1)
(11)
(25)
(30)
(35)
(8)
(28)

Polymorphism Thr 959 Thr ACC/ACT 2877 20




(43)

Polymorphism Leu 988 Leu CTC/CTT 2964 20




(8)
(43)

Polymorphism Leu 998 Leu CTG/TTG 2992 20




(14)

Polymorphism IVS20+61g/a g/a 3050 IVS20




(43)

Polymorphism IVS20-14t/a tgtcc/tgacc 3051 IVS20




(43)

Polymorphism IVS21+83a/t a/t 3190 IVS21




(43)

Polymorphism IVS21-20c/t cccgt/cctgt 3191 IVS21




(14)

Polymorphism IVS22-34a/g gcagc/gcggc 3329 IVS22




(8)

Polymorphism IVS23-12c/t tccat/tctat 3523 IVS23




(43)

Polymorphism IVS23-30a/t a/t 3523 IVS23
Homozygous
Compound:
  • W1408R
  • R1640W
  • N1868I
  • L1894L
  • P1401P
AR682-03
AR682-04


(30)

Polymorphism IVS24+32g/a ccgtc/ccagt 3607 IVS24




(43)

Polymorphism IVS24-16t/a tcttt/tcatt 3608 IVS24




(43)

Polymorphism Leu 1232 Leu CTT/CTG 3696 25




(43)

Polymorphism IVS25-82g/c g/c 3814 IVS25




(25)

Polymorphism Pro 1314 Thr CCC/ACC 3940 26




(37)
(43)

Polymorphism IVS27-35a/t ccaca/cctca 4129 IVS27




(43)

Polymorphism IVS27-71a/t aagat>aagtt 4129 IVS27





(28)

Polymorphism Leu 1395 Pro CTT/CCT 4184 08





(28)

Polymorphism Pro 1401 Pro CCC/CCA 4203 28

AR682-03


(23)
(8)
(30)
(43)
(14)

Polymorphism IVS28+4c/t tgcgc/tgtgc 4253 IVS28




(43)

Polymorphism IVS28+43g/a gggca/ggaca 4253 IVS28




(14)

Polymorphism IVS28-38g/a gcgcc/gcacc 4254 IVS28




(43)
(14)
(28)

Polymorphism IVS28-47t/c tgttg/tgctg 4254 IVS28




(43)

Polymorphism IVS29+32a/g agact/aggct 4352 IVS29




(43)

Polymorphism IVS29+13g/a acgcg/acacg 4352 IVS29




(21)
(14)

Polymorphism Cys 1502 Cys TGC/TGT 4506 30




(43)

Polymorphism IVS30+35g/c ctgcc/ctccc 4539 IVS30




(43)

Polymorphism IVS30+40c/t tgcca/tgtca 4539 IVS30




(43)

Polymorphism IVS30+3g/a g/a 4539 IVS30




(43)

Polymorphism IVS30+21del g acggg/ac_gg 4539 IVS30




(43)

Polymorphism IVS32-38c/t ttcgt/tttgt 4668 IVS32




(8)

Polymorphism IVS32-15c/t tcctg/tcttg 4668 IVS32




(8)

Polymorphism Asp 1582 Asp GAC/GAT 4746 33




(43)

Polymorphism IVS33+48c/t aacta>aatta 4773 IVS33




(11)

Polymorphism IVS33-16del gt ttgtt/tt__t 4774 IVS33




(8)

Polymorphism Ala 1637 Thr GCC/ACC 4909 35




(8)
(43)

Polymorphism IVS35-32g/a tcgcc/tcacc 5019 IVS35




(8)

Polymorphism IVS36+20g/a gcgcc/gcagg 5196 IVS36




(43)

Polymorphism IVS37+45g/t ctggt/cttgt 5312 IVS37




(43)

Polymorphism IVS38-50del a agagg/ag_gg 5461 IVS38




(8)

Polymorphism IVS38-10t/c tctct/tccct 5461 IVS38




(23)
(8)
(43)
(28)

Polymorphism IVS38-51ins g agagg/aggagg 5461 IVS38




(43)

Polymorphism IVS38-38del t ggttt/gg_tt 5461 IVS38

Japanese


(13)

Polymorphism IVS38-52del g agaga ggggg/aga_a ggggg 5461 IVS38




(14)

Polymorphism IVS38-50ins a agaga ggggg/agaga agggg g 5461 IVS38




(14)

Polymorphism IVS39+6del12bpins11bp gg tggtagccgagg cc/gg cggtcgagggc cc 5584 IVS39




(8)

Polymorphism IVS39-17t/a aattc>aaatc 5584 IVS39





(28)

Polymorphism IVS39-70c/t ccttc/ctttg 5585 IVS39

AR682-03


(43)
(14)

Polymorphism Asn 1868 Ile AAT/ATT 5603 40 +Tsp509I Compound:
  • 2588G>C
  • R943Q
  • P1401P
  • R1640W
  • W1408R
  • L1894L
AR682-03


(23)
(29)
(11)
(8)
(30)
(43)
(14)

Polymorphism Leu 1894 Leu CTG/CTC 5682 40
Compound:
  • R1640W
  • 2588G>C
  • R943Q
  • P1401P
  • N1868I
AR682-01
Japanese


(23)
(25)
(11)
(8)
(30)
(43)
(14)
(13)
(28)

Polymorphism IVS40-24a/c a/c 5715 IVS40




(43)

Polymorphism IVS40-25a/c acagc/accgc 5715 IVS40




(8)

Polymorphism Leu 1938 Leu TTA/TTG 5814 40

Japanese


(8)
(43)
(14)
(13)

Polymorphism IVS41+37a/c a/c 5835 IVS41




(43)

Polymorphism IVS41-10a/g a/g 5835 IVS41




(8)

Polymorphism IVS41-40c/a gttct/gtttct 5836 IVS41
Homozygous in all individuals tested


(11)

Polymorphism IVS41-16ins t gttct/gtttct 5836 IVS41
Homozygous in all individuals tested


(11)

Polymorphism IVS41-11g/a tcgta/tcata 5836 IVS41

Japanese


(23)
(43)
(14)
(11)
(13)

Polymorphism IVS41-37ins tc accgt/accctg t 5836 IVS41
Homozygous in all individuals tested


(11)

Polymorphism IVS41-43c/a ctctc/ctatc 5836 IVS41




(43)

Polymorphism IVS41-3g/a g/a 5836 IVS41




(43)
(14)

Polymorphism IVS41-24g/a g/a 5836 IVS41




(43)

Polymorphism Pro 1948 Leu CCA/CTA 5843 42




(23)
(10)
(11)
(25)
(35)
(8)
(43)
(14)

Polymorphism Pro 1948 Pro CCA/CCG 5844 42




(25)
(8)
(43)
(14)
(13)

Polymorphism Asp 1956 Asp GAC/GAT 5868 42




(43)

Polymorphism Val 1962 Val GTT/GTC 5886 42




(25)

Polymorphism IVS42+22c/a c/a 5898 IVS42




(43)

Polymorphism Met 1984 Leu ATG>ACA 5951 43





(28)

Polymorphism IVS43+1g/t AG gtg/AG ttg 6005 IVS43




(4)

Polymorphism IVS43-16g/a ttgct/ttact 6006 IVS43




(4)
(25)
(43)
(14)
(28)

Polymorphism IVS43-17g/a g/a 6006 IVS43




(43)

Polymorphism Ile 2023 Ile ATC/ATT 6069 44




(10)
(8)
(43)
(14)

Polymorphism Leu 2026 Leu CTG/TTG 6076 44




(10)

Polymorphism Ile 2083 Ile ATC/ATT 6249 45




(23)
(10)
(8)
(43)
(28)

Polymorphism Leu 2085 Leu CTC/CTT 6255 45




(43)

Polymorphism IVS45+7g/a ctgcg/ctacg 6282 IVS45




(8)
(43)

Polymorphism Asp 2095 Asp GAT/GAC 6285 46

Japanese


(23)
(8)
(43)
(13)

Polymorphism Val 2114 Val GTG/GTA 6345 46




(43)

Polymorphism Ile 2231 Ile ATC/ATT 6693 48




(23)

Polymorphism Leu 2241 Val CTG/GTG 6721 48




(14)

Polymorphism IVS48+21c/t accga/actga 6729 IVS48




(25)
(23)
(8)
(43)
(14)

Polymorphism IVS48-3t/c tctag/tccag 6730 IVS48




(8)
(43)
(14)

Polymorphism IVS48-27c/g tacct/tagct 6730 IVS48




(43)

Polymorphism Val 2244 Val GTG/GTA 6732 49




(8)
(43)

Polymorphism IVS49+27g/c cagct/cacct 6816 IVS49




(25)
(8)
(43)
(14)

Polymorphism IVS49-85c/t gacat/gataa 6817 IVS49




(8)
(43)

Polymorphism 3'UTR+26c/a agcct/agact 6823 3'UTR




(43)

RP Leu 541 Pro CTA>CCA 1622 12 -TspRI Homozygous
Compound:
  • Single
  • In cis A1038V
14753
goto HGMD
(19)

RP Ala 1038 Val GCC>GTC 3113 21 -SfaI Compound:
  • single
  • In cis: L541P
14753
goto HGMD 601691-0003 (19)

RP Val 2050 Leu GTT>CTT 6148 45
Compound:
  • single
175997
goto HGMD 601691-0005 (19)

STGD Met 1 Val ATG>GTG 0001 01
Compound:
  • single
Reported sequence change: ATG>GTC
Null mutation 071-004


(8)

STGD 38del9bp AAG AAC TGG ACC>A__ ___ ___ _CC 0038 01
Compound:
  • single
034-026
034-037


(8)

STGD Trp 15 ter TGG>TGA 0045 01
Compound:
  • single

goto HGMD
(23)

STGD Arg 18 Trp CGG>TGG 0052 01
Homozygous
goto HGMD
(15)

STGD Arg 24 His CGC>CAC 0071 02
Compound:
  • W1408R;R1640W
  • In cis: D1532N
AR33
goto HGMD
(20)
(31)

STGD 106delT TTA TTT CTG>TTA _TT CTG 0106 02
Compound:
  • single

goto HGMD
(23)
(43)

STGD IVS2+1g>a AT gta>AT ata 0160 IVS02


Splice Site Mutation


(43)

STGD Cys 54 Tyr TGC>TAC 0161 03
Compound:
  • 2588G>C
  • R1108C
  • V935A
  • P1380L

Splice Site Mutation 032-020
035-012
071-007
AR661
goto HGMD
(20)
(25)
(8)
(31)
(43)
(16)

STGD Asn 58 Lys AAC>AAG 0174 03
Compound:
  • L1201R

Missense 071-003


(8)

STGD Ala 60 Val GCG>GTG 0179 03
Heterozygous
Compound:
  • single
032-069
goto HGMD
(20)
(8)
(43)

STGD Gly 65 Glu GGA>GAA 0194 03
Compound:
  • single
032-072
goto HGMD
(12)
(8)
(43)
(16)

STGD Pro 68 Arg CCG>CGG 0203 03


goto HGMD
(20)

STGD Cys 75 Gly TGC>GGC 0223 03


goto HGMD
(20)
(43)

STGD Val 77 Glu GTG>GAG 0231 03
Compound:
  • IVS13+2t>c
Reported sequence: GTG>CAG
Missense 032-072


(8)

STGD 247delCAAA TTT CAA AGC>TTT ___>GC 0247 03


Splice Site Mutation


(43)

STGD 247delCAAA TTT CAA AGC>TTT ___ _GC 0247 03




(43)

STGD 250insCAAA insCAAA 0250 03
Compound:
  • G1961E
  • single
Null mutation
STGD-A 034-039
Lpr


(21)
(33)
(8)

STGD Asn 96 Asp AAC>GAC 0286 03




(25)

STGD Asn 96 His AAC>CAC 0286 03




(25)

STGD Ser 100 Pro TCC>CCC 0298 03




(43)

STGD 324insT GAT TTT>GAT TTT T 0324 04
Heterozygot
Compound:
  • single
STGD-C Prc


(21)
(14)

STGD Pro 143 Leu CCG>CTG 0428 04




(16)

STGD Arg 152 ter CGA>TGA 0454 05
Compound:
  • Single
  • R2107C

Null mutation 032-018


(36)
(8)
(43)
(28)

STGD Arg 152 Gln CGA>CAA 0455 05
Heterozygous
Compound:
  • single
STGD-A Sps


(21)
(14)
(16)
(28)

STGD Ile 156 Val ATC>GTC 0466 05 -EcoRV
+FokI




(25)

STGD Gly 172 Ser GGC>AGC 0514 05




(16)

STGD Gln 190 His CAG>CAC 0570 05
Compound:
  • G1961E

Splice Site Mutation 034-013


(8)

STGD IVS5-2a>g gcag T>gcgg T 0571 IVS05


goto HGMD
(15)

STGD IVS5-1g>t tgcag TTC>tgcat TTC 0571 IVS05
In cis:
  • R1108C
  • 1256delG
STGD-B Csn


(14)

STGD Ala 192 Thr GCT>ACT 0574 05




(43)

STGD Ala 192 Thr GCT>ACT 0574 06




(43)

STGD Ser 206 Arg AGC>AGG 0618 06




(12)
(37)
(39)
(43)

STGD Arg 212 Cys CGC>TGC 0634 06
Homozygous
Compound:
  • R212H
In cis:
  • L541P
  • A1038V
STGD-B Slz
goto HGMD
(15)
(33)
(43)
(14)
(28)

STGD Arg 219 Thr AGA>ACA 0656 06




(16)

STGD Arg 220 Cys CGC>TGC 0658 06




(43)

STGD Arg 220 Cys CGC>TGC 0658 06




(43)

STGD 661delG CGC GGG>CGC_GG 0661 06




(43)

STGD 661delG CGC GGG>CGC _GG 0661 05




(43)

STGD 664del13bp GGG GCA AAG ACG GTG CGC>GGG___ ___ ___ _GC 0664 06
Heterozygous
Null mutation 032-005
032-039
goto HGMD
(20)
(8)

STGD 666del11bp GCA AAG ACG GTG CGC>GC_ ___ ___ ___ _GC 0666 05




(43)

STGD Cys 230 Ser GCT AAA CAG>GCT _AA CAG 0688 06
In cis:
  • E1022K
STGD-B Bdn


(14)

STGD Leu 244 Pro CTG>CCG 0731 06
Homozygous
Missense 032-076


(8)

STGD Asp 249 Gly GAC>GGC 0746 06


goto HGMD
(20)
(43)

STGD Val 256 Val GTG>GTT 0768 06
Heterozygous
Splice Site Mutation South African


(23)
(16)
(28)

STGD IVS6-1g/t cag CT>cat CT 0769 IVS06


goto HGMD
(23)

STGD 832delT TTA TCT>TTA _CT 0832 07
Compound:
  • P1486L
  • In cis: R1300Q

Null mutation 032-060


(8)

STGD Thr 300 Asn ACC>AAC 0899 07


goto HGMD
(12)
(43)

STGD Pro 309 Arg CCA>CGA 0926 08
Compound:
  • R1300Q

Missense 032-012


(8)

STGD Arg 333 Trp CGG>TGG 0997 08




(43)

STGD Ser 336 Cys TCC>TGC 1007 08


goto HGMD
(20)
(16)

STGD Tyr 340 Asp TAT>GAT 1018 08


goto HGMD
(20)

STGD Asn 380 Lys AAT>AAA 1140 09




(43)

STGD Arg 408 ter CGA>TGA 1222 09




(43)

STGD His 423 Arg CAC>CGC 1268 10
Compound:
  • V767D
  • P1380L
  • W1408R
  • R1640W
AR682-04


(36)
(8)
(16)

STGD Val 424 Ala GTT>GTC 1272 10




(43)

STGD Ser 445 Arg AGC>AGG 1335 10




(25)

STGD 1341delG CAG ATG>CA_ ATG 1341 10


goto HGMD
(12)

STGD 1344delG CAG ATG>CA_ ATG 1344 10




(43)

STGD 1387delTT GAC TTT TTG>GAC __T TTG 1387 11
Heterozygous
Compound:
  • G1961E
STGD-A Mrs


(14)

STGD Glu 471 Lys GAA>AAA 1411 11 -MboII

goto HGMD
(16)

STGD 1513delATCAC AAC ATC ACT>AAC ___ __T 1513 11




(43)

STGD 1526delC CGC ACC CTC>CGC A_C CTC 1526 11
Homozygous
In cis:
  • IVS5-1g>t
  • R1108C
STGD-B Csn


(14)

STGD Asp 523 Glu GAT>GAG 1569 12


goto HGMD
(20)

STGD Phe 525 Cys TTT>TGT 1575 12
Compound:
  • I1846T

Missense 032-054


(8)

STGD Arg 537 Cys CGT>TGT 1609 12
Compound:
  • V989A
  • 2588G>C

Missense 032-046
034-038


(8)

STGD Leu 541 Pro CTA>CCA 1622 12 -TspRI Compound:
  • single
  • R212C
  • 2588G>C
  • A1038V
  • G1961E
  • L2027F
  • In cis A1038V
STGD-B 032-095
034-022
035-001
032-009
032-023
034-035
Slz
Sl
Cpt
goto HGMD
(20)
(36)
(8)
(43)
(14)
(16)

STGD Ala 549 Pro GCC>CCC 1645 12
Compound:
  • G1961E

Missense 032-011


(8)

STGD Gly 550 Arg GGA>AGA 1648 12
Compound:
  • single
  • L2027F

Missense 032-044
AR484


(8)
(31)

STGD Arg 572 Gln CGA>CAA 1715 12


goto HGMD
(20)

STGD Arg 572 Pro CGA>CCA 1715 12


goto HGMD
(20)

STGD Arg 602 Trp CGG>TGG 1804 13


goto HGMD
(20)
(25)
(36)
(43)
(28)

STGD Arg 602 Gln CGG>CAG 1805 13
Compound:
  • V643M

Missense 032-085


(8)
(43)

STGD Ile 604 Ser ATC>AGC 1811 13

Japanese


(13)

STGD Gly 607 Trp GGG>TGG 1819 13




(43)